Graduate School of Biosphere Science > Organization > Assessment of Environmental Dynamics Division
| Assessment of Environmental Dynamics Division |
This division aims to study the dynamics and management of the biosphere based on analytical and assessment approaches. Research activities extend to all biomes from the ocean bottom to high-mountain glaciers, to all organisms from single-celled bacteria to gigantic whales, and to all bio-related materials from inorganic nutrients to various complex organic compounds. The major research focus is placed on bio-production mechanisms, food chain dynamics and material cycling in both aquatic and terrestrial ecosystems.
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Marine Ecosystem Dynamics
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Understanding of biosphere (mainly marine) and ecosystem dynamics through ecological studies of organisms from unicellular bacteria/algae to gigantic zooplankton.
1) Mechanisms of jellyfish blooms and their impact on the marine ecosystem and fisheries (Uye, S.)
2) Ecological roles of microorganisms in various environments from forests, rivers, to oceans and the extremosphere (Naganuma, T.)
3) Symbiosis and diversity in unicellular algae (Koike, K.)
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<Academic Staff>
UYE Shin-ichi (Professor)
NAGANUMA Takeshi (Associate Professor)
KOIKE Kazuhiko (Associate Professor)
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A gigantic Echizen jellyfish

An expedition to the Arctic
to collect extremophilic bacteria
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Marine Ecosystem and Evolution
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The oceans constitute the largest part of the earth’s biosphere and provide habitats for various creatures from microbes to whales. We study how marine biodiversity came about, and how the marine ecosystem has evolved over geologic time.
1) Understanding the structure and evolution of the marine ecosystem (Yamamoto, H.)
2) Evolution, diversity and symbiosis in chemosynthesis-based ecosystems (Fujiwara, Y.)
3)Diversity, evolution and origin of microbial eukaryotes (protists) (Takishita, K.)
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<Academic Staff>
YAMAMOTO Hiroyuki (Visiting Professor)
FUJIWRA Yoshihiro (Visiting Professor)
TAKISHITA Kiyotaka (Visiting Associate Professor)
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Research at the hydrothermal vent field of Okinawa Trough (depth 1500 m)
Colony of deep-sea clams found around the seafloor observatory off Hatsushima in Sagami Bay (depth 1100 m)
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Conservation and Management of Coastal Ecosystems
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We perform various researches to effectively and sustainably promote fisheries in coastal seas. Under the philosophy “REVIVAL of the FERTILE SEA”, emphasis is placed on environmental conservation and coastal ecology, particularly concerning tidal-flat, seaweed bed, and harmful algal blooms
1) Molecular ecology (Hamaguchi, M.)
2) Coastal conservation ecology, algal ecophysiology
(Yoshida, G.)
3) Red tide science, aquatic virology (Nagasaki, K.)
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<Academic Staff>
HAMAGUCHI Masami (Visiting Professor)
NAGASAKI Keizo (Visiting Professor)
YOSHIDA Goro (Visiting Associate Professor)
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Fishes in a seaweed bed

Virus infecting a harmful
bloom-forming alga |
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Evaluation of Plant Environment
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The laboratory of Plant Science investigates how plants grow and develop in response to environmental factors examined from various facets of plant structure and function.
1) Vibration techniques applied to fruit texture and tree physiology (Sakurai, N.)
2) Molecular dynamics of cell wall polysaccharide synthesis (Nakagawa, N.)
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<Academic Staff>
SAKURAI Naoki (Professor)
NAKAGAWA Naoki (Assistant Professor)
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Measurement of fruit quality
by vibration technique

Mutant (css) seedlings with altered
cell wall and abnormal sucrose
sensitivity (indicated by arrows) developed in our laboratory
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Plant Environmental Science
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We conduct various studies on the assessment and analysis of soil microbial biomass, microfloral diversity and interactions among plant-soil-microorganisms in order to improve plant production and to maintain soil sustainability and fertility.
1) Assessment of soil microbial biomass and soil conditions for optimal the plant growth and environmental conservation
(Kouno, K.)
2) Effects of organic materials on soil microflora useful for plant growth and the control of soil-borne diseases
(Nagaoka, T.)
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<Academic Staff>
KOUNO Kenji (Professor)
NAGAOKA Toshinori (Associate Professor)
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The role of microbial biomass
in soil nutrient availability
and environmental conservation
(Click the picture to enlarge)

Improvement of phosphorus
availability in soils
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Assessment of Microbial Environment
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Root-secreted compounds have impacts on soil nutrient dynamics and plant-microbial interactions in the rhizosphere. In order to understand a microcosmic biosphere ‘the rhizosphere,’ we are studying both functions of microbes and plants and their interactions.
1) Study on functions of root-secreted compounds and microorganisms involved in P dynamics in soils (Wasaki, J.)
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<Academic Staff>
WASAKI Jun (Associate Professor)
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Lupine plants which can grow well under low P condition
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Cluster root formed by lupin plants to enhance P acquisition
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