Answering a century-old question on the origins of life

The missing link isn’t a not-yet-discovered fossil, after all. It’s a tiny, self-replicating globule called a coacervate droplet, developed by two researchers in Japan to represent the evolution of chemistry into biology.

A team of Japanese scientists found the missing link between chemistry and biology in the origins of life

 

They published their results on September 24 in the Nature Communications.  

“Chemical evolution was first proposed in the 1920s as the idea that life first originated with the formation of macromolecules from simple small molecules, and those macromolecules formed molecular assemblies that could proliferate,” said first-author Muneyuki Matsuo, assistant professor of chemistry in the Graduate School of Integrated Sciences for Life at Hiroshima University. “Since then, many studies have been conducted to verify the RNA world hypothesis — where only self-replicating genetic material existed prior to the evolution of DNA and proteins — experimentally. However, the origin of molecular assemblies that proliferate from small molecules has remained a mystery for about a hundred years since the advent of the chemical evolution scenario. It has been the missing link between chemistry and biology in the origin of life.”

Matsuo partnered with Kensuke Kurihara, researcher at KYOCERA Corporation, to answer the century-old question: how did the free-form chemicals of early Earth become life? Like many researchers, they initially thought it came down to the environment: the ingredients formed under high pressure and temperature, then cooled into more life-friendly conditions. The issue was propagation.

“Proliferation requires spontaneous polymer production and self-assembly under the same conditions,” Matsuo said.

They designed and synthesized a new prebiotic monomer from amino acid derivatives as a precursor to the self-assembly of primitive cells. When added to room temperature water at atmospheric pressure, the amino acid derivatives condensed, arranging into peptides, which then spontaneously formed droplets. The droplets grew in size and in number when fed with more amino acids. The researchers also found that the droplets could concentrate nucleic acids — genetic material — and they were more likely to survive against external stimuli if they exhibited this function.

“A droplet-based protocell could have served as a link between ‘chemistry’ and ‘biology’ during the origins of life,” Matsuo said. “This study may serve to explain the emergence of the first living organisms on primordial Earth.”

The researchers plan to continue investigating the process of evolution from amino acid derivatives to primitive living cells, as well as improve their platform to verify and study the origins of life and continued evolution.

“By constructing peptide droplets that proliferate with feeding on novel amino acid derivatives, we have experimentally elucidated the long-standing mystery of how prebiotic ancestors were able to proliferate and survive by selectively concentrating prebiotic chemicals,” Matsuo said. “Rather than an RNA world, we found that ‘droplet world’ may be a more accurate description, as our results suggest that droplets became evolvable molecular aggregates — one of which became our common ancestor.”

Newly constructed proliferating peptide droplet
Image credit: Muneyuki Matsuo, Hiroshima University

At the time of the research for this paper, Matsuo was affiliated with the Department of Basic Science in The University of Tokyo’s Graduate School of Arts and Sciences. Matsuo and Kurihara were both associated with the Department of Creative Research in the Exploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences. Kurihara was also affiliated with the Institute of Laser Engineering, Osaka University; the Institute for Extra-cutting-edge Science and Technology Avant-garde Research, Japan Agency for Marine-Earth Science & Technology; Faculty of Education, Utsunomiya University; and the Department of Life Coordination-Complex Molecular Science, Biomolecular Functions, Institute for Molecular Science, National Institutes of Natural Sciences.

ExCELLS, Japan Society for the Promotion of Science, Yoshida Scholarship Foundation, Kurita Water and Environment Foundation, Oil & Fat Industry Kaikan, Kao Foundation for Arts and Science, The Public Foundation of Chubu Science and Technology Centre; The Hori Sciences and Arts Foundation, Hiroshima University, National Institutes of Natural Sciences and Sekisui Chemical Co. Ltd. supported this work.

About the study

Journal: Nature Communications
Title: Proliferating coacervate droplets as the missing link between chemistry and biology in the origins of life
Authors: Muneyuki Matsuo & Kensuke Kurihara
DOI: 10.1038/s41467-021-25530-6

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